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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916011.1_cds_XP_016465698.1_58628
CDS Infomation

[gene=LOC107788538] [db_xref=GeneID:107788538] [protein=pseudouridine kinase-like] [protein_id=XP_016465698.1] [location=complement(join(87681..87739,87918..88482,89154..89236,90028..90142,90229..90326,90566..90613,91186..91288,92404..92529,92625..92684))] [gbkey=CDS]
Sequence

ATGAATCGTTTTCCCGATAAGAATTCACCGGAAAATGAAACCATTAATGGCATCCAATCG
GGTTCTTACAAAGAGGGGCAAGCTAGAAACTTAACAGTAGAGCCAGTAGTGATTGGGGGA
ATGGTGTTGGATGTAAATGCCACATCTTCCATGCCTGCTAATCCAGGGACCTCCACTCCT
GGAAAGGTTATCTTTTCATTCGGTGGTGTGGCAAGGAATGTTGCTGATTGCATCTCAAAG
CTTGAAGCAAGACCATTCATGATAAGCGCCGTTGGATTTGACATGGCAGGAAATTTGCTA
CTGGGACATTGGGAATCTGCTGGATTATCCACAGAAGGTATTCAGAGAAATCGCAATATT
GAGACTGCTGTTGTTTGCTATATCTTTGATGAGAAAGGTGAAGTGGCAGCTGGCGTAGCT
AGGGTAGAATCAATTGAAAAGTTTCTCACCCCAAGGTGGATTGAAAAGTTCAAGTGCAAA
ATAAGTTCTGCTCCAATATTGATGGTGGATGCAAATTTGACTTCTTCTTCTCTTGAAGCA
TCTTGTCAAATGGCTGCTCAGTTTAATACTCCAGTCTGGTTTGAGCCTGTATCAGTCGCC
AAATCTAGAAGAGTTGCTTCAGTTGTCCAGTATGTAAGTTTTGCATCACCTAATGAAGAT
GAACTTATTGCCATGGCAAATGCCATATCCGGCAGAGACATATTTCATACAATTCGGAAA
GATCATGGTACTATAAAGCTGTCCAAGGAATCTTTGTTCCAAATGCTTAAACCTGCAATA
TGGCTATTGCTGGACAAAGGTGTTAAGGTAGTTGTTGTAACGCTTGGATCACATGGGGTA
TTCTTATGCTCCAATGCAAAGTCCAATCTTGAGAAACTTGTTTTCAAGGAAAACCAACCC
TCTCACTTCAGTAAACAGTTATACGAAGCTATTGATACAGTTTGTCCAAGGGATCAGCTT
TTTGGTACTTCAAAGTGTGGGCCGATCTCAAATCTTTTTGCTGTCCATTTTCCTGCACTT
TCTGCTTCAGTAGTGAGGCTTACAGGTGCTGGAGATTGCTTAGTTGGTGGGATGATAGCT
TCGTTGTGTGCTGGTTTGGATGTCATGCAAAGTGTAGCAGTTGGGATTGCAGCTGCTAAA
GTTGCTGTTGAAGTAGAAAGCAATGTTCCTGCAGAGTATTGTTTGGCCAGACTAGCAGAT
GATGCAAGGTCTGTATACTCTGGTGCTACGATACTTCTGTGTCAATCCAAGTTGTAG

Peptide Sequence

PEP ID

XP_016465698.1
PEP Infomation

PREDICTED: pseudouridine kinase-like [Nicotiana tabacum]
Sequence

MNRFPDKNSPENETINGIQSGSYKEGQARNLTVEPVVIGGMVLDVNATSSMPANPGTSTP
GKVIFSFGGVARNVADCISKLEARPFMISAVGFDMAGNLLLGHWESAGLSTEGIQRNRNI
ETAVVCYIFDEKGEVAAGVARVESIEKFLTPRWIEKFKCKISSAPILMVDANLTSSSLEA
SCQMAAQFNTPVWFEPVSVAKSRRVASVVQYVSFASPNEDELIAMANAISGRDIFHTIRK
DHGTIKLSKESLFQMLKPAIWLLLDKGVKVVVVTLGSHGVFLCSNAKSNLEKLVFKENQP
SHFSKQLYEAIDTVCPRDQLFGTSKCGPISNLFAVHFPALSASVVRLTGAGDCLVGGMIA
SLCAGLDVMQSVAVGIAAAKVAVEVESNVPAEYCLARLADDARSVYSGATILLCQSKL

Transcript Sequence

Gene sequence data has not been registered.